NL
EN

Postdoc Position in Engineering Microbiome-Immune-Pathogen Interaction in Infant Gut

  • Faculty of Science
  • 15512
  • PhD
  • €3,706 - €5,760
  • 38 hours
  • Closes on
    13-10-2026
Apply

Postdoc Position in Engineering Microbiome-Immune-Pathogen Interaction in Infant Gut

  • Faculty of Science
  • 15512
  • PhD
  • €3,706 - €5,760
  • 38 hours
  • Closes on
    13-10-2026
Apply

Working at the UvA

Join Us!

Do you want to investigate how the microbiome acquired in early life influences innate immunity and pathogen infection in vulnerable infants? Join an NWO Vidi project that combines advanced gut-on-a-chip technology, organoid models and microbiome approaches.

You will work in an interdisciplinary setting to establish novel infant gut models and apply it to investigate microbiota–immune-pathogen interactions, generating knowledge that can support future interventions to improve infant health.

We welcome applications from candidates with diverse backgrounds, experiences and perspectives. If you recognise yourself in the role but do not meet every listed preference, we encourage you to apply.

 

Working at the UvA

Join Us!

Do you want to investigate how the microbiome acquired in early life influences innate immunity and pathogen infection in vulnerable infants? Join an NWO Vidi project that combines advanced gut-on-a-chip technology, organoid models and microbiome approaches.

You will work in an interdisciplinary setting to establish novel infant gut models and apply it to investigate microbiota–immune-pathogen interactions, generating knowledge that can support future interventions to improve infant health.

We welcome applications from candidates with diverse backgrounds, experiences and perspectives. If you recognise yourself in the role but do not meet every listed preference, we encourage you to apply.

 

All about this vacancy

This is what you will do

You will

  • establish an anaerobic gut-microbiome-on-a-chip platform tailored to the human infant gut and investigate how early colonisation by commensal bacteria or pathobionts affects the development and function of the infant gut microbiome, innate immune system and mucosal barrier;
  • design and fabricate mesofluidic gut models using the available research facilities;
  • co-culture organoid-derived intestinal epithelium, immune cells and synthetic microbial communities (SynComs) that reflect infant gut physiology;
  • coordinate and maintain the collaboration between mechanical engineers, microbiologists and translational microbiome researchers at Amsterdam UMC;
  • present research findings at scientific conferences and publish results in peer-reviewed journals.

 

What we ask of you

You have/are

  • a degree (PhD, or equivalent) in Biomedical Engineering, Cell Biology, Molecular Biology, Pharmacology, Biochemistry, or closely related fields. Candidates in the final stages of obtaining their degree are eligible to apply;
  • an excellent background in bioengineering, biomaterials, hands-on experience of primary cell culture, organoids, or microfluidic systems;
  • experience on or willing to learn anaerobic microbial cultivation and characterization techniques;
  • a problem-solving mindset and a strong motivation;
  • detail-oriented and can perform team-oriented in a multi-disciplinary team as well as independently;
  • fluent in English, both writing and speaking, demonstrated by first-author peer-reviewed publication;
  • experience in academic writing and presentation.

This is what we offer you

We offer a temporary employment contract for 38 hours per week for a period of 12 months. An extension for 2 years subsequently follows if we assess your performance positive. The preferred starting date is as soon as possible.

The gross monthly salary, based on 38 hours per week and dependent on relevant experience, is €3.706 to €5.760. This does not include 8% holiday allowance and 8.3% year-end allowance. The UFO profile Researcher 4 is applicable. A favourable tax agreement, the ‘30% ruling’, may apply to non-Dutch applicants.  The Collective Labour Agreement of Universities of the Netherlands is applicable.

 

All about this vacancy

This is what you will do

You will

  • establish an anaerobic gut-microbiome-on-a-chip platform tailored to the human infant gut and investigate how early colonisation by commensal bacteria or pathobionts affects the development and function of the infant gut microbiome, innate immune system and mucosal barrier;
  • design and fabricate mesofluidic gut models using the available research facilities;
  • co-culture organoid-derived intestinal epithelium, immune cells and synthetic microbial communities (SynComs) that reflect infant gut physiology;
  • coordinate and maintain the collaboration between mechanical engineers, microbiologists and translational microbiome researchers at Amsterdam UMC;
  • present research findings at scientific conferences and publish results in peer-reviewed journals.

 

What we ask of you

You have/are

  • a degree (PhD, or equivalent) in Biomedical Engineering, Cell Biology, Molecular Biology, Pharmacology, Biochemistry, or closely related fields. Candidates in the final stages of obtaining their degree are eligible to apply;
  • an excellent background in bioengineering, biomaterials, hands-on experience of primary cell culture, organoids, or microfluidic systems;
  • experience on or willing to learn anaerobic microbial cultivation and characterization techniques;
  • a problem-solving mindset and a strong motivation;
  • detail-oriented and can perform team-oriented in a multi-disciplinary team as well as independently;
  • fluent in English, both writing and speaking, demonstrated by first-author peer-reviewed publication;
  • experience in academic writing and presentation.

This is what we offer you

We offer a temporary employment contract for 38 hours per week for a period of 12 months. An extension for 2 years subsequently follows if we assess your performance positive. The preferred starting date is as soon as possible.

The gross monthly salary, based on 38 hours per week and dependent on relevant experience, is €3.706 to €5.760. This does not include 8% holiday allowance and 8.3% year-end allowance. The UFO profile Researcher 4 is applicable. A favourable tax agreement, the ‘30% ruling’, may apply to non-Dutch applicants.  The Collective Labour Agreement of Universities of the Netherlands is applicable.

 

Your place at the UvA

You will work in this team

The Faculty of Science has a student body of around 8,000, as well as 1,800 members of staff working in education, research or support services. Researchers and students at the Faculty of Science are fascinated by every aspect of how the world works, be it elementary particles, the birth of the universe or the functioning of the brain.

The Swammerdam Institute for Life Sciences (SILS) is located at the vibrant Amsterdam Science Park. SILS is one of eight institutes of the University of Amsterdam's Faculty of Science (FNWI). With around 240 employees, SILS carries out internationally high-quality life science research and provides education within various university programs. Research is also carried out in close cooperation with the medical, biotech, chemical, flavor, food & agricultural, and high-tech industries, and revolves around 4 main themes, Cell & Systems biology, Neurosciences, Microbiology and Green Life Sciences. 

The mission of the Molecular Biology and Microbial Food Safety group is to understand the interaction of microbes and their environment. We focus on microbiomes in the human gut and oral cavity in collaboration with our Amsterdam partners the Amsterdam UMC (location AMC) and ACTA. We study the gut microbiome in the context of Inflammatory Bowl disorders and the development of Depression whereas the oral microbiome is linked to Preventitive Dentistry.

Want to know more about our organisation? Read more about working at the University of Amsterdam.

About the Faculty of Science

Researchers and students at the Faculty of Science are fascinated by every aspect of how the world works, whether it concerns elementary particles, the birth of the universe, or how the brain functions. The Faculty has a student population of approximately 8,000 students, as well as 1,800 staff members working in education, research, or support services.
Read more about the Faculty of Science

Your place at the UvA

This is where you will be working

You will work in this team

The Faculty of Science has a student body of around 8,000, as well as 1,800 members of staff working in education, research or support services. Researchers and students at the Faculty of Science are fascinated by every aspect of how the world works, be it elementary particles, the birth of the universe or the functioning of the brain.

The Swammerdam Institute for Life Sciences (SILS) is located at the vibrant Amsterdam Science Park. SILS is one of eight institutes of the University of Amsterdam's Faculty of Science (FNWI). With around 240 employees, SILS carries out internationally high-quality life science research and provides education within various university programs. Research is also carried out in close cooperation with the medical, biotech, chemical, flavor, food & agricultural, and high-tech industries, and revolves around 4 main themes, Cell & Systems biology, Neurosciences, Microbiology and Green Life Sciences. 

The mission of the Molecular Biology and Microbial Food Safety group is to understand the interaction of microbes and their environment. We focus on microbiomes in the human gut and oral cavity in collaboration with our Amsterdam partners the Amsterdam UMC (location AMC) and ACTA. We study the gut microbiome in the context of Inflammatory Bowl disorders and the development of Depression whereas the oral microbiome is linked to Preventitive Dentistry.

Want to know more about our organisation? Read more about working at the University of Amsterdam.

About the Faculty of Science

Researchers and students at the Faculty of Science are fascinated by every aspect of how the world works, whether it concerns elementary particles, the birth of the universe, or how the brain functions. The Faculty has a student population of approximately 8,000 students, as well as 1,800 staff members working in education, research, or support services.
Read more about the Faculty of Science

Important to know

Your application & contact

If you feel the profile fits you, and you are interested in the job, we look forward to receiving your application. You can apply online via the red button. We accept applications until and including 13 October 2026.

If you have any questions or do you require additional information? Please contact:

Applications should include the following information (all files besides your cv should be submitted in one single pdf file):

  • a motivation letter and detailed CV including the months (not just years) when referring to your education and work experience;
  • contact information of referees (not reference letters);
  • a list of publications

A knowledge security check can be part of the selection procedure.
(for details: national knowledge security guidelines)

Acquisition in response to this vacancy is not appreciated.

Diversity, Equity & Inclusion

As an employer, the UvA maintains an equal opportunities policy. We value diversity and are fully committed to being a place where everyone feels at home. We nurture inquisitive minds and perseverance and allow room for persistent questioning. With us, curiosity and creativity are the prevailing culture.
Read more
Studies show that women and members of underrepresented groups only apply for jobs if they meet 100% of the qualifications. Do you meet the educational requirements but not yet all of the requested experience? The UvA encourages you to apply anyway.

Important to know

Your application & contact

If you feel the profile fits you, and you are interested in the job, we look forward to receiving your application. You can apply online via the red button. We accept applications until and including 13 October 2026.

If you have any questions or do you require additional information? Please contact:

Applications should include the following information (all files besides your cv should be submitted in one single pdf file):

  • a motivation letter and detailed CV including the months (not just years) when referring to your education and work experience;
  • contact information of referees (not reference letters);
  • a list of publications

A knowledge security check can be part of the selection procedure.
(for details: national knowledge security guidelines)

Acquisition in response to this vacancy is not appreciated.
As an employer, the UvA maintains an equal opportunities policy. We value diversity and are fully committed to being a place where everyone feels at home. We nurture inquisitive minds and perseverance and allow room for persistent questioning. With us, curiosity and creativity are the prevailing culture.
Studies show that women and members of underrepresented groups only apply for jobs if they meet 100% of the qualifications. Do you meet the educational requirements but not yet all of the requested experience? The UvA encourages you to apply anyway.

Other interesting vacancies for you

View all vacancies

Other interesting vacancies for you

View all vacancies

Don't miss out on your dream job!

Sign up for a job alert and you'll receive automatic updates about new and relevant vacancies.

Don't miss out on your dream job!

Sign up for a job alert and you'll receive automatic updates about new and relevant vacancies.

This website uses cookies

We, and third parties, use cookies on our website. We use cookies to ensure that our website functions properly, to store your preferences, to gain insight into visitor behavior, but also for marketing and social media purposes (showing personalized advertisements). By clicking 'Accept', you agree to the use of all cookies. In our Cookie Statement. you can read more about the cookies we use and save or change your preferences. By clicking 'Refuse' you only agree to the use of functional cookies.