Assistant Professor Computational Analysis of Single-cell and Spatial Omics Data

Assistant Professor Computational Analysis of Single-cell and Spatial Omics Data

Working at the UvA

Join us!

We are on the lookout for an enthusiastic and motivated scientist to enhance our research and educational initiatives. In the role of Assistant Professor in the Biosystems Data Analysis group (BDA), you will have the chance to establish your own research agenda and contribute to teaching at both undergraduate and graduate levels.

BDA focuses on the development and application of methodology for the analysis of biological data, in particular at the omics level. We blend a wide range of expertise, including bioinformatics, data processing and mining, machine learning/deep learning, data fusion, and modelling. As an assistant professor you will work on computational methodology for single-cell and spatial omics data analysis, related to open questions on pattern finding, data integration, modelling and/or analysis of signalling and communication. Your expertise will complement existing expertise in BDA and will allow strong collaborations with various experimental research groups within SILS. This ranges from groups working on developmental biology to plant biology to neuroscience. In addition, various opportunities exist for collaboration at the University of Amsterdam outside SILS, e.g. with the Informatics Institute.

Working at the UvA

Join us!

We are on the lookout for an enthusiastic and motivated scientist to enhance our research and educational initiatives. In the role of Assistant Professor in the Biosystems Data Analysis group (BDA), you will have the chance to establish your own research agenda and contribute to teaching at both undergraduate and graduate levels.

BDA focuses on the development and application of methodology for the analysis of biological data, in particular at the omics level. We blend a wide range of expertise, including bioinformatics, data processing and mining, machine learning/deep learning, data fusion, and modelling. As an assistant professor you will work on computational methodology for single-cell and spatial omics data analysis, related to open questions on pattern finding, data integration, modelling and/or analysis of signalling and communication. Your expertise will complement existing expertise in BDA and will allow strong collaborations with various experimental research groups within SILS. This ranges from groups working on developmental biology to plant biology to neuroscience. In addition, various opportunities exist for collaboration at the University of Amsterdam outside SILS, e.g. with the Informatics Institute.

All about this vacancy

What are you going to do?

You will

  • develop and expand your own line of research in bioinformatics or systems biology;
  • be active in attracting external funding;
  • publish in international journals and present at conferences;
  • (co-)supervise PhD students;
  • teach in courses to bachelor and master students, and supervise student projects;
  • contribute to the development of new educational activities;
  • promote collaborations between research groups and share expertise;
  • develop your skills in coaching and inclusive leadership.

Your profile

You have/are

  • a PhD in Bioinformatics, Systems Biology, or similar;
  • some years of post-doctoral experience, with expertise in the analysis of single-cell omics and/or spatial omics data;
  • a good understanding of (large-scale) biological data analysis and systems modelling;
  • able to communicate with both data-scientists and biologists;
  • willing to contribute to valorization and outreach activities of the research group;
  • experience with acquisition of funding;
  • University Teaching Qualification (BKO) or the willingness to enrol in a program to achieve that within 2 years;
  • fluent in spoken and written English and Dutch.

If you are not fluent in Dutch, we expect you to acquire sufficient fluency in the Dutch language within three years of the start of the employment contract, to be able to teach in the Dutch bachelor courses. 

We will base our selection on your scientific track record and on your vision for future research, as well as on your teaching achievement, qualifications, and vision on future teaching. We invite inspiring researchers who can push forward their original views and project ideas in the context of a highly competitive academic research environment to respond.  

Our offer

We offer a temporary contract for 38 (1.0 FTE) hours a week, preferably starting on 1 September 2025, for the duration of 18 months. A permanent contract follows after positive assessment of your performance. The job profile Assistant Professor 2 is applicable. 

The salary, depending on relevant experience before the beginning of the employment contract, will be € 4.537 – 6.209 gross per month, based on a fulltime contract (38 hours a week). This is exclusive 8% holiday allowance and 8.3% end-of-year bonus. A favourable tax agreement, the ‘30% ruling’, may apply to non-Dutch applicants. The Collective Labour Agreement of Dutch Universities is applicable. 

Besides the salary and a vibrant and challenging environment at Science Park we offer you multiple fringe benefits:

  • 232 holiday hours per year (based on fulltime employment);
  • multiple courses to follow from our Teaching and Learning Centre;
  • a pension at ABP for which UvA pays two third part of the contribution;
  • the possibility to follow courses to learn Dutch;
  • help with housing for a studio or small apartment when you’re moving from abroad. 

Are you curious to read more about our extensive package of secondary employment benefits, take a look here.

All about this vacancy

What are you going to do?

You will

  • develop and expand your own line of research in bioinformatics or systems biology;
  • be active in attracting external funding;
  • publish in international journals and present at conferences;
  • (co-)supervise PhD students;
  • teach in courses to bachelor and master students, and supervise student projects;
  • contribute to the development of new educational activities;
  • promote collaborations between research groups and share expertise;
  • develop your skills in coaching and inclusive leadership.

Your profile

You have/are

  • a PhD in Bioinformatics, Systems Biology, or similar;
  • some years of post-doctoral experience, with expertise in the analysis of single-cell omics and/or spatial omics data;
  • a good understanding of (large-scale) biological data analysis and systems modelling;
  • able to communicate with both data-scientists and biologists;
  • willing to contribute to valorization and outreach activities of the research group;
  • experience with acquisition of funding;
  • University Teaching Qualification (BKO) or the willingness to enrol in a program to achieve that within 2 years;
  • fluent in spoken and written English and Dutch.

If you are not fluent in Dutch, we expect you to acquire sufficient fluency in the Dutch language within three years of the start of the employment contract, to be able to teach in the Dutch bachelor courses. 

We will base our selection on your scientific track record and on your vision for future research, as well as on your teaching achievement, qualifications, and vision on future teaching. We invite inspiring researchers who can push forward their original views and project ideas in the context of a highly competitive academic research environment to respond.  

Our offer

We offer a temporary contract for 38 (1.0 FTE) hours a week, preferably starting on 1 September 2025, for the duration of 18 months. A permanent contract follows after positive assessment of your performance. The job profile Assistant Professor 2 is applicable. 

The salary, depending on relevant experience before the beginning of the employment contract, will be € 4.537 – 6.209 gross per month, based on a fulltime contract (38 hours a week). This is exclusive 8% holiday allowance and 8.3% end-of-year bonus. A favourable tax agreement, the ‘30% ruling’, may apply to non-Dutch applicants. The Collective Labour Agreement of Dutch Universities is applicable. 

Besides the salary and a vibrant and challenging environment at Science Park we offer you multiple fringe benefits:

  • 232 holiday hours per year (based on fulltime employment);
  • multiple courses to follow from our Teaching and Learning Centre;
  • a pension at ABP for which UvA pays two third part of the contribution;
  • the possibility to follow courses to learn Dutch;
  • help with housing for a studio or small apartment when you’re moving from abroad. 

Are you curious to read more about our extensive package of secondary employment benefits, take a look here.

Your place at the UvA

About us

The Swammerdam Institute for Life Sciences (SILS) is located at the vibrant Amsterdam Science Park. SILS is one of eight institutes of the University of Amsterdam's Faculty of Science (FNWI). With around 240 employees, SILS carries out internationally high-quality life science research and provides education within various university programs. Research is also carried out in close cooperation with the medical, biotech, chemical, flavor, food & agricultural, and high-tech industries, and revolves around 4 main themes, Cell & Systems biology, Neurosciences, Microbiology and Green Life Sciences. 

Organisational unit

The University of Amsterdam is ambitious, creative and committed. An inspiration to students since 1632, a vanguard player in international science and a partner in innovation.
The University of Amsterdam is the largest university in the Netherlands, with the broadest range of courses on offer. An intellectual hub with 42,000 students, 6,000 staff and 3,000 PhD students. Connected by a culture of curiosity.

Your place at the UvA

This is where you will be working

About us

The Swammerdam Institute for Life Sciences (SILS) is located at the vibrant Amsterdam Science Park. SILS is one of eight institutes of the University of Amsterdam's Faculty of Science (FNWI). With around 240 employees, SILS carries out internationally high-quality life science research and provides education within various university programs. Research is also carried out in close cooperation with the medical, biotech, chemical, flavor, food & agricultural, and high-tech industries, and revolves around 4 main themes, Cell & Systems biology, Neurosciences, Microbiology and Green Life Sciences. 

Organisational unit

The University of Amsterdam is ambitious, creative and committed. An inspiration to students since 1632, a vanguard player in international science and a partner in innovation.
The University of Amsterdam is the largest university in the Netherlands, with the broadest range of courses on offer. An intellectual hub with 42,000 students, 6,000 staff and 3,000 PhD students. Connected by a culture of curiosity.

Important to know

Your application & contact

For questions about the position or additional information, please contact: 

If this opportunity excites you and you meet the qualifications, we look forward to your application! We accept applications until and including 20 June, 2025.

Please submit:

  • a motivation letter and CV, including a list of publications and your funding and teaching track record (if applicable);
  • contact information for at least two academic referees;
  • a 1-page research statement.

A knowledge security check can be part of the selection procedure (for details: National knowledge security guidelines).

Diversity, Equity & Inclusion

As an employer, the UvA maintains an equal opportunities policy. We value diversity and are fully committed to being a place where everyone feels at home. We nurture inquisitive minds and perseverance and allow room for persistent questioning. With us, curiosity and creativity are the prevailing culture.

Important to know

Your application & contact

For questions about the position or additional information, please contact: 

If this opportunity excites you and you meet the qualifications, we look forward to your application! We accept applications until and including 20 June, 2025.

Please submit:

  • a motivation letter and CV, including a list of publications and your funding and teaching track record (if applicable);
  • contact information for at least two academic referees;
  • a 1-page research statement.

A knowledge security check can be part of the selection procedure (for details: National knowledge security guidelines).

As an employer, the UvA maintains an equal opportunities policy. We value diversity and are fully committed to being a place where everyone feels at home. We nurture inquisitive minds and perseverance and allow room for persistent questioning. With us, curiosity and creativity are the prevailing culture.

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