PhD Candidate in Experimental Biological Physics of Cardiovascular Systems

PhD Candidate in Experimental Biological Physics of Cardiovascular Systems

Working at the UvA

Join Us!

The project is part of the Vascular Immunology Consortium, an ambitious interdisciplinary research initiative supported by the University of Amsterdam. This consortium bridges the Faculties of Science and Medicine, fostering a highly collaborative and integrative research environment. The overarching objective of the consortium is to elucidate the complex mechanisms by which the vascular system regulates the human immune response, with a particular focus on how vascular integrity and function are modulated under inflammatory conditions, including leukocyte extravasation and the biophysical stresses imposed by hypertension and blood flow. As part of this team, you will collaborate closely with Dr. Joachim Goedhart (Section Molecular Cytology) to investigate collective cell migration and mechano-sensing in endothelial cells under varying fluid flow conditions. Specifically, you will explore luminal and sub-luminal vascular interactions, contributing essential insights into immune cell recruitment and adhesion processes under shear stress and inflammatory environments.

Working at the UvA

Join Us!

The project is part of the Vascular Immunology Consortium, an ambitious interdisciplinary research initiative supported by the University of Amsterdam. This consortium bridges the Faculties of Science and Medicine, fostering a highly collaborative and integrative research environment. The overarching objective of the consortium is to elucidate the complex mechanisms by which the vascular system regulates the human immune response, with a particular focus on how vascular integrity and function are modulated under inflammatory conditions, including leukocyte extravasation and the biophysical stresses imposed by hypertension and blood flow. As part of this team, you will collaborate closely with Dr. Joachim Goedhart (Section Molecular Cytology) to investigate collective cell migration and mechano-sensing in endothelial cells under varying fluid flow conditions. Specifically, you will explore luminal and sub-luminal vascular interactions, contributing essential insights into immune cell recruitment and adhesion processes under shear stress and inflammatory environments.

All about this vacancy

This is what you will do

The main goal of this project is to understand the mechanics of cells and tissue under various flow conditions. You will work with custom-made fluidic setups integrated with microscopy techniques to directly observe and quantify the responses of endothelial cells and tissues to external fluid forces. Your research will include designing experiments with innovative and non-standard tools, performing imaging using confocal microscopy and advanced imaging methods, processing images through open-source software (e.g., Napari, trackpy, CellPose, …), analyzing data, and developing statistical models to interpret your findings.

During your PhD research, you will apply a variety of techniques, including (but not limited to): Microfluidic flow experiments and rheological measurements, Microscopy (including confocal microscopy and fluorescence lifetime imaging microscopy), Advanced image analysis methods, Micro-pipette manipulations, Small-scale force measurements, Optogenetics approaches, Statistical physics methods and modeling.

You will carry out your experiments systematically, ensuring thorough documentation and clear organization of your data. Regular discussion of your progress in lab meetings, collaboration with team members, and supervision of bachelor and master students during internships will also form essential parts of your role.

Tasks and responsibilities:

  • complete a PhD thesis within the official appointment duration of four years;
  • Perform experiments to measure and understand the mechanical response of endothelial cells and tissues under controlled fluidic conditions.
  • Conduct microscopy imaging and advanced quantitative analyses.
  • Process experimental data using open-source image analysis and perform statistical analysis and modeling.
  • perform your experiments in a systematic and well controlled manner and keep accurate records by properly documenting and organizing your work;
  • discuss your work in our lab meetings, incorporate feedback and give input to others;
  • assist in teaching and supervise BSc/MSc students during their research internship;
  • participate in the Faculty of Science PhD training programme.

What we ask of you

You are passionate about science and have a particular interest in fundamental cell and tissue biophysics with affinity for microscopy, image analysis, and statistical physics models. You like a challenge and are motivated to work in a highly interdisciplinary environment. You are a team player with good communication and problem-solving skills.

Your experience and profile

You have/are:

  • a recent MSc degree in the physics or biological physics (or a related area);
  • experience with imaging and image-analysis.
  • great programming skills (e.g., Python)
  • have great knowledge of fluid mechanics and statistical physics
  • affinity with imaging techniques, data analysis, data visualization;
  • a high intrinsic motivation and aptitude for fundamental research (reflected by your CV);
  • fluent in English, both written and spoken.

Cell culture experience would be an asset.

This is what we offer you

A temporary contract for 38 hours per week for the duration of 4 years (the initial contract will be for a period of 18 months and after satisfactory evaluation it will be extended for a total duration of 4 years). The preferred starting date 1 November 2025 or sooner. This should lead to a dissertation (PhD thesis). We will draft an educational plan that includes attendance of courses and (international) meetings. We also expect you to assist in teaching undergraduates and master students.

The gross monthly salary, based on 38 hours per week and dependent on relevant experience, ranges between € 2,901 to € 3,707 (scale P).This does not include 8% holiday allowance and 8,3% year-end allowance. The UFO profile PhD is applicable. A favourable tax agreement, the ‘30% ruling’, may apply to non-Dutch applicants. The Collective Labour Agreement of Universities of the Netherlands is applicable.

All about this vacancy

This is what you will do

The main goal of this project is to understand the mechanics of cells and tissue under various flow conditions. You will work with custom-made fluidic setups integrated with microscopy techniques to directly observe and quantify the responses of endothelial cells and tissues to external fluid forces. Your research will include designing experiments with innovative and non-standard tools, performing imaging using confocal microscopy and advanced imaging methods, processing images through open-source software (e.g., Napari, trackpy, CellPose, …), analyzing data, and developing statistical models to interpret your findings.

During your PhD research, you will apply a variety of techniques, including (but not limited to): Microfluidic flow experiments and rheological measurements, Microscopy (including confocal microscopy and fluorescence lifetime imaging microscopy), Advanced image analysis methods, Micro-pipette manipulations, Small-scale force measurements, Optogenetics approaches, Statistical physics methods and modeling.

You will carry out your experiments systematically, ensuring thorough documentation and clear organization of your data. Regular discussion of your progress in lab meetings, collaboration with team members, and supervision of bachelor and master students during internships will also form essential parts of your role.

Tasks and responsibilities:

  • complete a PhD thesis within the official appointment duration of four years;
  • Perform experiments to measure and understand the mechanical response of endothelial cells and tissues under controlled fluidic conditions.
  • Conduct microscopy imaging and advanced quantitative analyses.
  • Process experimental data using open-source image analysis and perform statistical analysis and modeling.
  • perform your experiments in a systematic and well controlled manner and keep accurate records by properly documenting and organizing your work;
  • discuss your work in our lab meetings, incorporate feedback and give input to others;
  • assist in teaching and supervise BSc/MSc students during their research internship;
  • participate in the Faculty of Science PhD training programme.

What we ask of you

You are passionate about science and have a particular interest in fundamental cell and tissue biophysics with affinity for microscopy, image analysis, and statistical physics models. You like a challenge and are motivated to work in a highly interdisciplinary environment. You are a team player with good communication and problem-solving skills.

Your experience and profile

You have/are:

  • a recent MSc degree in the physics or biological physics (or a related area);
  • experience with imaging and image-analysis.
  • great programming skills (e.g., Python)
  • have great knowledge of fluid mechanics and statistical physics
  • affinity with imaging techniques, data analysis, data visualization;
  • a high intrinsic motivation and aptitude for fundamental research (reflected by your CV);
  • fluent in English, both written and spoken.

Cell culture experience would be an asset.

This is what we offer you

A temporary contract for 38 hours per week for the duration of 4 years (the initial contract will be for a period of 18 months and after satisfactory evaluation it will be extended for a total duration of 4 years). The preferred starting date 1 November 2025 or sooner. This should lead to a dissertation (PhD thesis). We will draft an educational plan that includes attendance of courses and (international) meetings. We also expect you to assist in teaching undergraduates and master students.

The gross monthly salary, based on 38 hours per week and dependent on relevant experience, ranges between € 2,901 to € 3,707 (scale P).This does not include 8% holiday allowance and 8,3% year-end allowance. The UFO profile PhD is applicable. A favourable tax agreement, the ‘30% ruling’, may apply to non-Dutch applicants. The Collective Labour Agreement of Universities of the Netherlands is applicable.

Your place at the UvA

You will work in this team

The Faculty of Science has a student body of around 8,000, as well as 1,800 members of staff working in education, research or support services. Researchers and students at the Faculty of Science are fascinated by every aspect of how the world works, be it elementary particles, the birth of the universe or the functioning of the brain.

The Institute of Physics (IoP) of the University of Amsterdam is located in the center of the Amsterdam Science Park. The IoP – as part of the Faculty of Science –is housed in a modern building with excellent labs and technical facilities. Surrounded by several national research institutes and with our partners at the Vrije Universiteit (VU) Amsterdam, the institute is part of a strong physics center of international standing.

The Van der Waals - Zeeman Institute for Experimental Physics (IoP-WZI) is part of the IoP and home to three research clusters: Quantum Gases & Quantum Information (QG&QI), Quantum Materials (QMat), and Soft Matter (SM). For more information about Dr. Mazi Jalaal’s research group see www.fluidlab.nl

More about the UvA

The University of Amsterdam is ambitious, creative and committed. An inspiration to students since 1632, a vanguard player in international science and a partner in innovation.
The University of Amsterdam is the largest university in the Netherlands, with the broadest range of courses on offer. An intellectual hub with 42,000 students, 6,000 staff and 3,000 PhD students. Connected by a culture of curiosity.

Your place at the UvA

This is where you will be working

You will work in this team

The Faculty of Science has a student body of around 8,000, as well as 1,800 members of staff working in education, research or support services. Researchers and students at the Faculty of Science are fascinated by every aspect of how the world works, be it elementary particles, the birth of the universe or the functioning of the brain.

The Institute of Physics (IoP) of the University of Amsterdam is located in the center of the Amsterdam Science Park. The IoP – as part of the Faculty of Science –is housed in a modern building with excellent labs and technical facilities. Surrounded by several national research institutes and with our partners at the Vrije Universiteit (VU) Amsterdam, the institute is part of a strong physics center of international standing.

The Van der Waals - Zeeman Institute for Experimental Physics (IoP-WZI) is part of the IoP and home to three research clusters: Quantum Gases & Quantum Information (QG&QI), Quantum Materials (QMat), and Soft Matter (SM). For more information about Dr. Mazi Jalaal’s research group see www.fluidlab.nl

More about the UvA

The University of Amsterdam is ambitious, creative and committed. An inspiration to students since 1632, a vanguard player in international science and a partner in innovation.
The University of Amsterdam is the largest university in the Netherlands, with the broadest range of courses on offer. An intellectual hub with 42,000 students, 6,000 staff and 3,000 PhD students. Connected by a culture of curiosity.

Important to know

Your application & contact

If you feel the profile fits you, and you are interested in the job, we look forward to receiving your application. You can apply online via the button below. We accept applications until and including 17 August 2025. The interviews will be held in the course of September 2025.

If you have any questions or do you require additional information? Please contact:

Applications should include the following information (all files besides your cv should be submitted in one single pdf file):

  • a detailed CV including the months (not just years) when referring to your education and work experience;
  • a letter of motivation;
  • a list of publications;
  • the names and email addresses of two references who can provide letters of recommendation.

A knowledge security check can be part of the selection procedure (for details: national knowledge security guidelines). Only complete applications received within the response period via the link below will be considered.

Diversity, Equity & Inclusion

As an employer, the UvA maintains an equal opportunities policy. We value diversity and are fully committed to being a place where everyone feels at home. We nurture inquisitive minds and perseverance and allow room for persistent questioning. With us, curiosity and creativity are the prevailing culture.

Important to know

Your application & contact

If you feel the profile fits you, and you are interested in the job, we look forward to receiving your application. You can apply online via the button below. We accept applications until and including 17 August 2025. The interviews will be held in the course of September 2025.

If you have any questions or do you require additional information? Please contact:

Applications should include the following information (all files besides your cv should be submitted in one single pdf file):

  • a detailed CV including the months (not just years) when referring to your education and work experience;
  • a letter of motivation;
  • a list of publications;
  • the names and email addresses of two references who can provide letters of recommendation.

A knowledge security check can be part of the selection procedure (for details: national knowledge security guidelines). Only complete applications received within the response period via the link below will be considered.

As an employer, the UvA maintains an equal opportunities policy. We value diversity and are fully committed to being a place where everyone feels at home. We nurture inquisitive minds and perseverance and allow room for persistent questioning. With us, curiosity and creativity are the prevailing culture.

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